Positron BASIC Community

I have 2 development boards that both have their own serial port and are using the 16F887 proton bootloader going through a USB-serial adapter, lets call it port1, port2 on same PC. I was wondering if there was anyway to have multiple instances of Proton basic open at same time? My code files both have different file names. I'm trying to avoid the hassle of constantly changing ports in the
microloader app. I have tried several ways like holding shift, etc but nothing worked.
Thanks
Daniel H.